Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | AMR72_RS04920 | Not Available | Positive | 1139339 - 1139824 | 19103.6 |
| adenylosuccinate synthase | AMR72_RS04925 | Not Available | Positive | 1139934 - 1141205 | 46943.5 |
| osta-like protein | AMR72_RS04930 | Not Available | Positive | 1141477 - 1143138 | 63615.9 |
| aspartate aminotransferase family protein | AMR72_RS04935 | Not Available | Positive | 1143231 - 1144427 | 44076.6 |
| tetratricopeptide repeat protein | AMR72_RS04940 | Not Available | Positive | 1144530 - 1145939 | 55254.2 |
| shikimate dehydrogenase | AMR72_RS04945 | Not Available | Positive | 1146119 - 1146859 | 27874.6 |
| duf349 domain-containing protein | AMR72_RS04950 | Not Available | Positive | 1146998 - 1149112 | 82596.2 |
| t9ss type a sorting domain-containing protein | AMR72_RS04955 | Not Available | Negative | 1149534 - 1153274 | 129343.0 |
| hypothetical protein | AMR72_RS04960 | Not Available | Negative | 1153458 - 1154588 | 42453.0 |
| nucleoside triphosphate pyrophosphohydrolase | AMR72_RS04965 | Not Available | Negative | 1154604 - 1155377 | 29925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
