Flavobacterium psychrophilum

RodNon-motile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium psychrophilum is a Gram-negative, rod-shaped bacterium that is psychrotolerant, thriving in cold temperatures, and is a Chemoheterotroph, requiring organic compounds for energy production, which it obtains through the breakdown of complex molecules, and can be found in various body sites of fish, including the skin, gills, and internal organs, of species such as salmon and trout, and is an Obligate Aerobe, requiring oxygen to survive. The Gram-negative characteristic is due to the composition of its cell wall, which contains a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. Its rod-shaped morphology allows it to move and colonize efficiently in its aquatic environment. As a psychrotolerant microbe, Flavobacterium psychrophilum can grow in a wide range of temperatures, but its optimal growth occurs in cold temperatures, typically below 15°C. Its chemoheterotrophic nature means that it relies on external sources of organic matter for energy and carbon, breaking down complex molecules such as proteins, carbohydrates, and fats. The bacterium's ability to inhabit various body sites of fish makes it a significant pathogen in aquaculture, causing diseases such as bacterial cold water disease and rainbow trout fry syndrome. Flavobacterium psychrophilum's obligate aerobic nature necessitates the presence of oxygen for its metabolic processes, and it is often found in well-oxygenated aquatic environments. The bacterium's ability to produce extracellular enzymes and toxins allows it to infect and cause disease in fish, and its presence has been detected in fish farms and wild fish populations around the world, highlighting the need for effective disease management strategies in aquaculture.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium psychrophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature15
Temperature rangePsychrophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Flavobacterium psychrophilum

Accession NumberQFQM00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6212 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitDI539_09430Not Available+1971529 - 197232830268.3
hypothetical proteinDI539_09435Not Available+1972325 - 197292423049.0
1_nc_021800: hypothetical proteinDI539_09440Not Available+1972929 - 197333015421.9
1_nc_021800: hypothetical proteinDI539_09445Not Available+1973333 - 197380017641.3
1_nc_021800: structural proteinDI539_09450Not Available+1973801 - 197494042653.1
AttlNot AvailableNot Available+1973855 - 1973866Not Available
1_nc_021800: structural proteinDI539_09455Not Available+1974941 - 197647058716.9
1_nc_021800: phage tail tape measure proteinDI539_09460Not Available+1976507 - 1979893121333.0
Major capsid proteinDI539_09465Not Available+1980222 - 198071619256.0
Rna polymerase sigma factorDI539_09470Not Available+1980716 - 198148629484.6

Displaying genes 1 – 10 of 6277 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites