Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS04620 | Not Available | Positive | 1066288 - 1066821 | 19620.2 |
| duf4241 domain-containing protein | AMR72_RS04625 | Not Available | Positive | 1066903 - 1067634 | 28253.2 |
| biotin--[acetyl-coa-carboxylase] ligase | AMR72_RS04630 | Not Available | Negative | 1067708 - 1068436 | 26815.4 |
| ribosome silencing factor | AMR72_RS04635 | Not Available | Positive | 1068538 - 1068909 | 13983.5 |
| atp-dependent zinc metalloprotease ftsh | AMR72_RS04640 | Not Available | Positive | 1068922 - 1070847 | 71353.7 |
| lactate utilization protein b/c | AMR72_RS04645 | Not Available | Positive | 1070951 - 1071553 | 23108.5 |
| phosphatidate cytidylyltransferase | AMR72_RS04650 | Not Available | Positive | 1071555 - 1072382 | 30242.2 |
| phosphatidylserine decarboxylase family protein | AMR72_RS04655 | Not Available | Positive | 1072372 - 1073025 | 24274.1 |
| acyl-coa-binding protein | AMR72_RS04660 | Not Available | Positive | 1073025 - 1073288 | 10296.3 |
| superoxide dismutase | AMR72_RS04665 | Not Available | Positive | 1073300 - 1074076 | 28560.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
