Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | AMR72_RS04520 | Not Available | Negative | 1049247 - 1050005 | 28751.8 |
| abc transporter atp-binding protein | AMR72_RS04525 | Not Available | Positive | 1050119 - 1051030 | 34067.9 |
| redoxin family protein | AMR72_RS04530 | Not Available | Positive | 1051053 - 1053260 | 83036.0 |
| crp/fnr family transcriptional regulator | AMR72_RS04535 | Not Available | Positive | 1053367 - 1053948 | 22817.5 |
| pirin family protein | AMR72_RS04540 | Not Available | Positive | 1054076 - 1054951 | 32661.6 |
| ycei family protein | AMR72_RS04545 | Not Available | Positive | 1055063 - 1055593 | 19219.2 |
| hypothetical protein | AMR72_RS04550 | Not Available | Negative | 1055656 - 1056105 | 17490.9 |
| rlua family pseudouridine synthase | AMR72_RS04555 | Not Available | Negative | 1056209 - 1057255 | 39962.5 |
| pasta domain-containing protein | AMR72_RS04560 | Not Available | Negative | 1057248 - 1057868 | 23181.0 |
| glpgli family protein | AMR72_RS04565 | Not Available | Negative | 1057950 - 1058744 | 30051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
