Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS04420 | Not Available | Negative | 1034534 - 1034905 | 13813.9 |
| excinuclease abc subunit b | AMR72_RS04425 | Not Available | Negative | 1035055 - 1035456 | 15207.6 |
| alpha/beta hydrolase | AMR72_RS04430 | Not Available | Positive | 1035509 - 1036303 | 30406.8 |
| duf1456 family protein | AMR72_RS04435 | Not Available | Positive | 1036470 - 1036904 | 16157.7 |
| rhodanese-like domain-containing protein | AMR72_RS04440 | Not Available | Negative | 1036972 - 1037286 | 11539.4 |
| thioredoxin family protein | AMR72_RS04445 | Not Available | Negative | 1037312 - 1037917 | 22372.1 |
| tlpa disulfide reductase family protein | AMR72_RS04450 | Not Available | Negative | 1037929 - 1038528 | 23193.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMR72_RS04455 | Not Available | Positive | 1038668 - 1039123 | 17501.4 |
| nad(p)h-dependent oxidoreductase | AMR72_RS04460 | Not Available | Positive | 1039136 - 1039774 | 23390.9 |
| ycei family protein | AMR72_RS04465 | Not Available | Positive | 1039812 - 1040378 | 20193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
