Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_00852 | AMR72_RS04320 | Not Available | Negative | 1016405 - 1016740 | Not Available |
| thioredoxin family protein | AMR72_RS04325 | Not Available | Positive | 1016800 - 1017366 | 21060.1 |
| hypothetical protein | AMR72_RS04330 | Not Available | Negative | 1017367 - 1017927 | 21042.6 |
| peptidylprolyl isomerase | AMR72_RS04335 | Not Available | Negative | 1018083 - 1019015 | 33530.7 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMR72_RS04340 | Not Available | Positive | 1019133 - 1019933 | 30247.7 |
| duf1569 domain-containing protein | AMR72_RS04345 | Not Available | Positive | 1019973 - 1020425 | 17366.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | AMR72_RS04350 | Not Available | Positive | 1020539 - 1021213 | 25146.3 |
| 50s ribosomal protein l19 | AMR72_RS04355 | Not Available | Positive | 1021420 - 1021773 | 13737.9 |
| hypothetical protein | AMR72_RS04360 | Not Available | Positive | 1021952 - 1022176 | 8582.56 |
| nadp-dependent isocitrate dehydrogenase | AMR72_RS04365 | Not Available | Positive | 1022410 - 1024635 | 80570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
