Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | AMR72_RS04270 | Not Available | Negative | 1003331 - 1004362 | 38115.2 |
| hypothetical protein | AMR72_RS04275 | Not Available | Positive | 1004601 - 1005218 | 24490.2 |
| atp-binding protein | AMR72_RS04280 | Not Available | Positive | 1005277 - 1009425 | 155474.0 |
| peptidase t | AMR72_RS04285 | Not Available | Positive | 1009507 - 1010748 | 45906.9 |
| preprotein translocase subunit yajc | AMR72_RS04290 | Not Available | Negative | 1010818 - 1011108 | 10920.6 |
| duf1573 domain-containing protein | AMR72_RS04295 | Not Available | Negative | 1011117 - 1011599 | 16620.8 |
| transcription antitermination factor nusb | AMR72_RS04300 | Not Available | Negative | 1011621 - 1012532 | 35337.0 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | AMR72_RS04305 | Not Available | Negative | 1012652 - 1013755 | 39446.2 |
| abc transporter atp-binding protein | AMR72_RS04310 | Not Available | Positive | 1013951 - 1015708 | 66085.3 |
| pur family dna/rna-binding protein | AMR72_RS04315 | Not Available | Positive | 1015780 - 1016151 | 14727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
