Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj domain-containing protein | AMR72_RS04120 | Not Available | Positive | 973172 - 973840 | 25222.5 |
| hypothetical protein | AMR72_RS04125 | Not Available | Positive | 973884 - 974198 | 12018.3 |
| hypothetical protein | AMR72_RS04130 | Not Available | Positive | 974231 - 974806 | 22083.4 |
| voc family protein | AMR72_RS04135 | Not Available | Positive | 974811 - 975179 | 14245.7 |
| protein phosphatase 2c domain-containing protein | AMR72_RS04140 | Not Available | Positive | 975256 - 975993 | 27930.4 |
| hypothetical protein | AMR72_RS04145 | Not Available | Positive | 976056 - 976436 | 14170.2 |
| duf4421 family protein | AMR72_RS04150 | Not Available | Negative | 976443 - 977348 | 34440.9 |
| glycosyltransferase family 4 protein | AMR72_RS04155 | Not Available | Negative | 977880 - 979157 | 48023.2 |
| yfho family protein | AMR72_RS04160 | Not Available | Negative | 979179 - 981635 | 91909.8 |
| duf4834 family protein | AMR72_RS04165 | Not Available | Negative | 981860 - 982132 | 10834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
