Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | AMR72_RS04070 | Not Available | Positive | 963232 - 963993 | 27742.9 |
| luxr c-terminal-related transcriptional regulator | AMR72_RS04075 | Not Available | Negative | 963990 - 964748 | 29211.5 |
| thioredoxin-dependent thiol peroxidase | AMR72_RS04080 | Not Available | Negative | 964868 - 965320 | 16831.0 |
| endonuclease iii | AMR72_RS04085 | Not Available | Positive | 965355 - 966026 | 25447.9 |
| rna polymerase sigma factor | AMR72_RS04090 | Not Available | Negative | 966240 - 966824 | 22713.5 |
| ydei/ompd-associated family protein | AMR72_RS04095 | Not Available | Negative | 967060 - 967533 | 18217.1 |
| ld-carboxypeptidase | AMR72_RS04100 | Not Available | Negative | 967530 - 968417 | 32351.9 |
| excinuclease abc subunit uvra | AMR72_RS04105 | Not Available | Positive | 968910 - 971699 | 103922.0 |
| hypothetical protein | AMR72_RS04110 | Not Available | Positive | 971927 - 972394 | 18193.0 |
| smi1/knr4 family protein | AMR72_RS04115 | Not Available | Positive | 972578 - 972997 | 16436.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
