Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | AMR72_RS03970 | Not Available | Negative | 937583 - 938206 | 22907.0 |
| lysophospholipid acyltransferase family protein | AMR72_RS03975 | Not Available | Positive | 938325 - 939215 | 35283.1 |
| aminotransferase class v-fold plp-dependent enzyme | AMR72_RS03980 | Not Available | Negative | 939205 - 940704 | 56397.0 |
| porin | AMR72_RS03985 | Not Available | Negative | 940829 - 942049 | 46293.7 |
| 50s ribosomal protein l11 methyltransferase | AMR72_RS03990 | Not Available | Positive | 942235 - 943068 | 32040.8 |
| atp-dependent clp protease adaptor clps | AMR72_RS03995 | Not Available | Positive | 943091 - 943366 | 10291.1 |
| lipocalin family protein | AMR72_RS04000 | Not Available | Negative | 943420 - 943950 | 19471.2 |
| triple tyrosine motif-containing protein | AMR72_RS04005 | Not Available | Positive | 944318 - 947119 | 107385.0 |
| tonb-dependent receptor | AMR72_RS04010 | Not Available | Positive | 947362 - 950433 | 110982.0 |
| ragb/susd family nutrient uptake outer membrane protein | AMR72_RS04015 | Not Available | Positive | 950438 - 951925 | 55265.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
