Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | AMR72_RS03770 | Not Available | Negative | 892920 - 893792 | 31580.0 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | AMR72_RS03775 | Not Available | Positive | 894710 - 897160 | 90050.7 |
| homoserine kinase | AMR72_RS03780 | Not Available | Positive | 897163 - 898083 | 31984.6 |
| threonine synthase | AMR72_RS03785 | Not Available | Positive | 898080 - 899369 | 47462.9 |
| glycine cleavage system aminomethyltransferase gcvt | AMR72_RS03790 | Not Available | Positive | 899455 - 900537 | 39509.2 |
| carboxy terminal-processing peptidase | AMR72_RS03795 | Not Available | Positive | 900540 - 902585 | 77194.8 |
| yebc/pmpr family dna-binding transcriptional regulator | AMR72_RS03800 | Not Available | Positive | 902656 - 903366 | 26751.8 |
| rna polymerase sigma factor | AMR72_RS03805 | Not Available | Positive | 903564 - 904118 | 21224.2 |
| hypothetical protein | AMR72_RS03810 | Not Available | Positive | 904148 - 904669 | 20106.5 |
| hypothetical protein | AMR72_RS03815 | Not Available | Positive | 904650 - 905702 | 39032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
