Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitronate monooxygenase family protein | AMR72_RS03720 | Not Available | Positive | 877765 - 878826 | 38155.7 |
| phenylalanine--trna ligase subunit beta | AMR72_RS03725 | Not Available | Positive | 878906 - 881329 | 89369.5 |
| hypothetical protein | AMR72_RS03730 | Not Available | Negative | 881400 - 882692 | 47964.4 |
| dna gyrase subunit a | AMR72_RS03735 | Not Available | Negative | 882707 - 885277 | 96165.4 |
| atp-dependent clp protease atp-binding subunit | AMR72_RS03740 | Not Available | Positive | 885558 - 888107 | 95282.0 |
| 30s ribosomal protein s6--l-glutamate ligase | AMR72_RS03745 | Not Available | Positive | 888355 - 889722 | 50410.3 |
| duf1304 domain-containing protein | AMR72_RS03750 | Not Available | Positive | 889733 - 890095 | 13200.8 |
| hypothetical protein | AMR72_RS03755 | Not Available | Positive | 890243 - 890647 | 15269.3 |
| duf1801 domain-containing protein | AMR72_RS03760 | Not Available | Positive | 890878 - 891291 | 15699.9 |
| histidine ammonia-lyase | AMR72_RS03765 | Not Available | Negative | 891343 - 892851 | 55776.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
