Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 n-terminal domain-containing protein | AMR72_RS03520 | Not Available | Negative | 826653 - 829556 | 109428.0 |
| hypothetical protein | AMR72_RS03525 | Not Available | Negative | 829643 - 830125 | 18341.7 |
| (fe-s)-binding protein | AMR72_RS03530 | Not Available | Negative | 830137 - 830931 | 29172.1 |
| hypothetical protein | AMR72_RS03535 | Not Available | Negative | 830940 - 831386 | 17158.2 |
| (fe-s)-binding protein | AMR72_RS03540 | Not Available | Negative | 831386 - 832717 | 50289.5 |
| mlad family protein | AMR72_RS03545 | Not Available | Negative | 832748 - 833707 | 35199.3 |
| n-acetylmuramoyl-l-alanine amidase | AMR72_RS03550 | Not Available | Negative | 833784 - 834923 | 41550.8 |
| putative lps assembly protein lptd | AMR72_RS03555 | Not Available | Positive | 835045 - 837753 | 102898.0 |
| t9ss type b sorting domain-containing protein | AMR72_RS03560 | Not Available | Positive | 837758 - 841066 | 123252.0 |
| rida family protein | AMR72_RS03565 | Not Available | Positive | 841069 - 841449 | 13740.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
