Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | AMR72_RS03470 | Not Available | Positive | 817249 - 818484 | 44943.2 |
| hypothetical protein | AMR72_RS03475 | Not Available | Negative | 818535 - 819410 | 32400.5 |
| formimidoylglutamase | AMR72_RS03480 | Not Available | Positive | 819513 - 820547 | 38182.5 |
| cation diffusion facilitator family transporter | AMR72_RS03485 | Not Available | Negative | 820551 - 821432 | 31355.9 |
| dead/deah box helicase | AMR72_RS03490 | Not Available | Positive | 821582 - 822859 | 47322.3 |
| hypothetical protein | AMR72_RS03495 | Not Available | Positive | 822919 - 823500 | 21464.8 |
| endonuclease/exonuclease/phosphatase family protein | AMR72_RS03500 | Not Available | Positive | 823566 - 824399 | 31477.4 |
| protease complex subunit prcb family protein | AMR72_RS03505 | Not Available | Negative | 824454 - 824885 | 15430.7 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | AMR72_RS03510 | Not Available | Negative | 824885 - 826018 | 42315.4 |
| duf1801 domain-containing protein | AMR72_RS03515 | Not Available | Negative | 826114 - 826569 | 17253.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
