Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase | AMR72_RS03320 | Not Available | Positive | 791488 - 792363 | 33302.4 |
| agmatine/peptidylarginine deiminase | AMR72_RS03325 | Not Available | Positive | 792446 - 793510 | 40250.7 |
| thioredoxin | AMR72_RS03330 | Not Available | Negative | 793589 - 793891 | 11306.0 |
| murein l,d-transpeptidase | AMR72_RS03335 | Not Available | Positive | 794350 - 795927 | 60001.9 |
| c40 family peptidase | AMR72_RS03340 | Not Available | Negative | 796054 - 796581 | 19618.8 |
| hypothetical protein | AMR72_RS03345 | Not Available | Positive | 796705 - 796902 | 7091.07 |
| spfh domain-containing protein | AMR72_RS03350 | Not Available | Positive | 796899 - 797384 | 18583.2 |
| hypothetical protein | AMR72_RS03355 | Not Available | Positive | 797418 - 797693 | 10135.2 |
| putative quinol monooxygenase | AMR72_RS03360 | Not Available | Negative | 797738 - 798025 | 10616.8 |
| nad(p)h-dependent oxidoreductase | AMR72_RS03365 | Not Available | Negative | 798028 - 798672 | 24150.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
