Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMR72_RS03070 | Not Available | Negative | 722820 - 723050 | 8448.32 |
| vit family protein | AMR72_RS03075 | Not Available | Positive | 723283 - 723978 | 24142.4 |
| tryptophan synthase subunit alpha | AMR72_RS03080 | Not Available | Negative | 724061 - 724831 | 28521.3 |
| tryptophan synthase subunit beta | AMR72_RS03085 | Not Available | Negative | 724828 - 726012 | 42891.5 |
| phosphoribosylanthranilate isomerase | AMR72_RS03090 | Not Available | Negative | 725999 - 726664 | 25332.6 |
| indole-3-glycerol phosphate synthase trpc | AMR72_RS03095 | Not Available | Negative | 726631 - 727419 | 29183.4 |
| anthranilate phosphoribosyltransferase | AMR72_RS03100 | Not Available | Negative | 727416 - 728408 | 36193.3 |
| aminodeoxychorismate/anthranilate synthase component ii | AMR72_RS03105 | Not Available | Negative | 728432 - 729007 | 20868.1 |
| anthranilate synthase component i family protein | AMR72_RS03110 | Not Available | Negative | 729010 - 730401 | 52964.5 |
| aldose epimerase family protein | AMR72_RS03115 | Not Available | Positive | 730814 - 731995 | 43657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
