Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS02870 | Not Available | Negative | 666933 - 667397 | 17262.7 |
| pkd domain-containing protein | AMR72_RS02875 | Not Available | Negative | 667414 - 668403 | 37090.6 |
| nlpc/p60 family protein | AMR72_RS02880 | Not Available | Positive | 668713 - 669270 | 20983.0 |
| hypothetical protein | AMR72_RS02885 | Not Available | Positive | 669273 - 670202 | 36200.4 |
| tssn family type vi secretion system protein | AMR72_RS02890 | Not Available | Positive | 670203 - 671066 | 33487.5 |
| hypothetical protein | AMR72_RS02895 | Not Available | Positive | 671079 - 672257 | 45199.6 |
| type vi secretion system tsso | AMR72_RS02900 | Not Available | Positive | 672271 - 672786 | 20060.1 |
| aaa family atpase | AMR72_RS02905 | Not Available | Positive | 672798 - 675239 | 90464.6 |
| gpw/gp25 family protein | AMR72_RS02910 | Not Available | Positive | 675220 - 675651 | 16661.1 |
| type vi secretion system baseplate subunit tssf | AMR72_RS02915 | Not Available | Positive | 675660 - 677516 | 71843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
