Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS02820 | Not Available | Negative | 654202 - 654585 | 14644.4 |
| rhs repeat-associated core domain-containing protein | AMR72_RS02825 | Not Available | Negative | 654587 - 658738 | 157592.0 |
| hypothetical protein | AMR72_RS02830 | Not Available | Negative | 658758 - 660092 | 50620.9 |
| type vi secretion system vgr family protein | AMR72_RS02835 | Not Available | Negative | 660095 - 661870 | 64070.1 |
| tetratricopeptide repeat protein | AMR72_RS02840 | Not Available | Negative | 662221 - 662904 | 25357.3 |
| hypothetical protein | AMR72_RS02845 | Not Available | Negative | 663010 - 663552 | 21159.9 |
| polymorphic toxin type 23 domain-containing protein | AMR72_RS02850 | Not Available | Negative | 663573 - 664511 | 34554.9 |
| type vi secretion system tube protein tssd | AMR72_RS02855 | Not Available | Negative | 664516 - 664911 | 14927.0 |
| type vi secretion system tube protein tssd | AMR72_RS02860 | Not Available | Negative | 665010 - 665399 | 14590.9 |
| duf5458 family protein | AMR72_RS02865 | Not Available | Negative | 665555 - 666868 | 50131.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
