Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | AMR72_RS00210 | Not Available | Positive | 37714 - 38232 | 19189.2 |
| rhodanese-like domain-containing protein | AMR72_RS00215 | Not Available | Positive | 38288 - 38683 | 14514.4 |
| histidine kinase | AMR72_RS00220 | Not Available | Positive | 38726 - 39472 | 28932.7 |
| lyttr family dna-binding domain-containing protein | AMR72_RS00225 | Not Available | Positive | 39441 - 40160 | 27285.2 |
| cation:proton antiporter | AMR72_RS00230 | Not Available | Positive | 40375 - 42648 | 83902.5 |
| hypothetical protein | AMR72_RS00235 | Not Available | Positive | 42660 - 43043 | 14087.2 |
| hypothetical protein | AMR72_RS00240 | Not Available | Positive | 43205 - 43861 | 24270.6 |
| efflux rnd transporter periplasmic adaptor subunit | AMR72_RS00245 | Not Available | Negative | 43928 - 45010 | 39322.3 |
| efflux rnd transporter permease subunit | AMR72_RS00250 | Not Available | Negative | 45012 - 48230 | 117049.0 |
| tolc family protein | AMR72_RS00255 | Not Available | Negative | 48243 - 49631 | 51640.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
