Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1697 domain-containing protein | AMR72_RS02105 | Not Available | Negative | 462154 - 462552 | 15156.5 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | AMR72_RS02110 | Not Available | Positive | 462619 - 464031 | 53692.0 |
| duf6452 family protein | AMR72_RS02115 | Not Available | Positive | 464053 - 464586 | 19774.4 |
| duf6048 family protein | AMR72_RS02120 | Not Available | Positive | 464558 - 465304 | 28121.4 |
| duf4294 domain-containing protein | AMR72_RS02125 | Not Available | Negative | 465356 - 466018 | 25436.2 |
| m42 family metallopeptidase | AMR72_RS02130 | Not Available | Positive | 466100 - 467191 | 40597.5 |
| ankyrin repeat domain-containing protein | AMR72_RS02135 | Not Available | Negative | 467248 - 467634 | 13570.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | AMR72_RS02140 | Not Available | Negative | 467839 - 468786 | 35902.6 |
| phoh family protein | AMR72_RS02145 | Not Available | Negative | 469093 - 470040 | 35765.9 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | AMR72_RS02150 | Not Available | Positive | 470144 - 470971 | 30614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
