Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4402 domain-containing protein | AMR72_RS02005 | Not Available | Negative | 442737 - 443249 | 16976.9 |
| atp phosphoribosyltransferase | AMR72_RS02010 | Not Available | Positive | 443891 - 444748 | 31352.8 |
| histidinol dehydrogenase | AMR72_RS02015 | Not Available | Positive | 444755 - 446044 | 46204.4 |
| histidinol-phosphate transaminase | AMR72_RS02020 | Not Available | Positive | 446037 - 447062 | 38379.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | AMR72_RS02025 | Not Available | Positive | 447059 - 448144 | 40603.3 |
| imidazole glycerol phosphate synthase subunit hish | AMR72_RS02030 | Not Available | Positive | 448141 - 448719 | 21466.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | AMR72_RS02035 | Not Available | Positive | 448716 - 449432 | 25905.3 |
| imidazole glycerol phosphate synthase subunit hisf | AMR72_RS02040 | Not Available | Positive | 449426 - 450178 | 26669.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | AMR72_RS02045 | Not Available | Positive | 450175 - 450768 | 22374.9 |
| carboxypeptidase-like regulatory domain-containing protein | AMR72_RS02050 | Not Available | Negative | 450817 - 453627 | 104941.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
