Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | AMR72_RS01955 | Not Available | Positive | 419278 - 420411 | 42045.7 |
| Trna-ser | Not Available | Not Available | Positive | 420564 - 420651 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 420956 - 421043 | Not Available |
| dknyy domain-containing protein | AMR72_RS01970 | Not Available | Negative | 421130 - 421843 | 27707.5 |
| glycosyl hydrolase | AMR72_RS01975 | Not Available | Negative | 422000 - 426775 | 171540.0 |
| alpha/beta fold hydrolase | AMR72_RS01980 | Not Available | Negative | 427060 - 427878 | 30347.8 |
| hypothetical protein | AMR72_RS01985 | Not Available | Negative | 428099 - 430609 | 94117.6 |
| duf4402 domain-containing protein | AMR72_RS01990 | Not Available | Negative | 430679 - 431170 | 16683.8 |
| fibronectin type iii domain-containing protein | AMR72_RS01995 | Not Available | Negative | 431211 - 441710 | 359853.0 |
| hypothetical protein | AMR72_RS02000 | Not Available | Negative | 441819 - 442679 | 31299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
