Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiix family permuted papain-like enzyme | AMR72_RS00160 | Not Available | Negative | 28215 - 28838 | 23591.7 |
| hypothetical protein | AMR72_RS00165 | Not Available | Negative | 28819 - 29286 | 18072.5 |
| alkaline phosphatase | AMR72_RS00170 | Not Available | Negative | 29360 - 30778 | 52296.9 |
| hypothetical protein | AMR72_RS00175 | Not Available | Positive | 30941 - 31429 | 18150.8 |
| diaminopimelate decarboxylase | AMR72_RS00180 | Not Available | Negative | 31494 - 32738 | 46314.6 |
| hypothetical protein | AMR72_RS00185 | Not Available | Negative | 32911 - 33414 | 18514.6 |
| adp-forming succinate--coa ligase subunit beta | AMR72_RS00190 | Not Available | Positive | 33840 - 35033 | 42966.7 |
| glycosyltransferase family 2 protein | AMR72_RS00195 | Not Available | Positive | 35204 - 36154 | 35454.1 |
| alpha/beta hydrolase | AMR72_RS00200 | Not Available | Negative | 36168 - 36983 | 30493.0 |
| response regulator | AMR72_RS00205 | Not Available | Negative | 37071 - 37502 | 16830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
