Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS01855 | Not Available | Positive | 403180 - 403443 | 10281.6 |
| hypothetical protein | AMR72_RS01860 | Not Available | Positive | 403500 - 403784 | 9647.63 |
| duf6146 family protein | AMR72_RS01865 | Not Available | Positive | 403871 - 404308 | 17077.3 |
| duf6787 family protein | AMR72_RS01870 | Not Available | Positive | 404402 - 404719 | 12281.4 |
| peptide-methionine (s)-s-oxide reductase msra | AMR72_RS01875 | Not Available | Negative | 404747 - 405277 | 19714.1 |
| abc transporter atp-binding protein | AMR72_RS01880 | Not Available | Positive | 405532 - 406218 | 25102.4 |
| tigr02757 family protein | AMR72_RS01885 | Not Available | Positive | 406293 - 407057 | 29109.9 |
| mepb family protein | AMR72_RS01890 | Not Available | Negative | 407054 - 407551 | 18982.9 |
| amino acid permease | AMR72_RS01895 | Not Available | Negative | 407551 - 409215 | 61030.9 |
| peroxiredoxin | AMR72_RS01900 | Not Available | Positive | 409471 - 410109 | 23581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
