Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | AMR72_RS17930 | Not Available | Positive | 4077223 - 4079121 | 70292.0 |
| hypothetical protein | AMR72_RS17935 | Not Available | Negative | 4079197 - 4079787 | 22052.1 |
| hypothetical protein | AMR72_RS17940 | Not Available | Negative | 4079822 - 4080463 | 23571.9 |
| bestrophin family protein | AMR72_RS17945 | Not Available | Negative | 4080993 - 4081859 | 33315.6 |
| hypothetical protein | AMR72_RS17950 | Not Available | Positive | 4082206 - 4083048 | 32423.2 |
| hypothetical protein | AMR72_RS17955 | Not Available | Positive | 4083088 - 4083336 | 9495.83 |
| exodeoxyribonuclease iii | AMR72_RS17960 | Not Available | Negative | 4084300 - 4085076 | 29833.9 |
| hypothetical protein | AMR72_RS17965 | Not Available | Negative | 4085141 - 4085830 | 26078.8 |
| glucose 1-dehydrogenase | AMR72_RS17970 | Not Available | Negative | 4085915 - 4086706 | 27842.4 |
| nacht domain-containing protein | AMR72_RS17975 | Not Available | Positive | 4086986 - 4089154 | 84306.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
