Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein | AMR72_RS17880 | Not Available | Positive | 4068036 - 4069163 | 41322.8 |
| ompw family protein | AMR72_RS17885 | Not Available | Negative | 4069209 - 4069898 | 24914.7 |
| hypothetical protein | AMR72_RS17890 | Not Available | Negative | 4070015 - 4070206 | 7299.43 |
| nuclear transport factor 2 family protein | AMR72_RS17895 | Not Available | Negative | 4070332 - 4070859 | 20097.0 |
| hypothetical protein | AMR72_RS17900 | Not Available | Negative | 4070936 - 4071643 | 27268.5 |
| dihydrolipoyl dehydrogenase | AMR72_RS17905 | Not Available | Negative | 4071730 - 4073118 | 49335.7 |
| abc transporter atp-binding protein | AMR72_RS17910 | Not Available | Negative | 4073241 - 4074995 | 66784.7 |
| trna pseudouridine(38-40) synthase trua | AMR72_RS17915 | Not Available | Negative | 4075010 - 4075744 | 28427.8 |
| metallophosphoesterase | AMR72_RS17920 | Not Available | Positive | 4075930 - 4076421 | 18518.3 |
| duf4293 domain-containing protein | AMR72_RS17925 | Not Available | Negative | 4076614 - 4077036 | 15893.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
