Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family metallopeptidase | AMR72_RS17730 | Not Available | Negative | 4010778 - 4011803 | 38515.1 |
| duf3667 domain-containing protein | AMR72_RS17735 | Not Available | Negative | 4011839 - 4012834 | 38995.8 |
| dienelactone hydrolase family protein | AMR72_RS17740 | Not Available | Negative | 4012990 - 4013760 | 27809.1 |
| type 1 glutamine amidotransferase domain-containing protein | AMR72_RS17745 | Not Available | Negative | 4013849 - 4014397 | 20277.0 |
| duf421 domain-containing protein | AMR72_RS17750 | Not Available | Positive | 4014548 - 4015240 | 26441.4 |
| hypothetical protein | AMR72_RS17755 | Not Available | Negative | 4015316 - 4016539 | 45616.2 |
| gnat family n-acetyltransferase | AMR72_RS17760 | Not Available | Positive | 4016683 - 4017174 | 18247.9 |
| stas/sec14 domain-containing protein | AMR72_RS17765 | Not Available | Positive | 4017276 - 4017647 | 13791.3 |
| pyridoxamine 5'-phosphate oxidase family protein | AMR72_RS17770 | Not Available | Positive | 4017674 - 4018201 | 19719.3 |
| yihy/virulence factor brkb family protein | AMR72_RS17775 | Not Available | Negative | 4018250 - 4019221 | 35454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
