Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | AMR72_RS01705 | Not Available | Negative | 374287 - 376263 | 73944.6 |
| na+/h+ antiporter | AMR72_RS01710 | Not Available | Negative | 376385 - 377989 | 60488.1 |
| isopenicillin n synthase family oxygenase | AMR72_RS01715 | Not Available | Positive | 378111 - 379067 | 36278.0 |
| translation initiation factor | AMR72_RS01720 | Not Available | Positive | 379134 - 379484 | 12818.2 |
| substrate-binding domain-containing protein | AMR72_RS01725 | Not Available | Positive | 379651 - 380496 | 31940.7 |
| transglutaminase domain-containing protein | AMR72_RS01730 | Not Available | Positive | 380522 - 381454 | 35590.7 |
| uracil-dna glycosylase | AMR72_RS01735 | Not Available | Negative | 381458 - 382123 | 24795.4 |
| endonuclease muts2 | AMR72_RS01740 | Not Available | Positive | 382255 - 384429 | 83144.2 |
| thiol-disulfide oxidoreductase dcc family protein | AMR72_RS01745 | Not Available | Positive | 384431 - 384850 | 16010.6 |
| t9ss type a sorting domain-containing protein | AMR72_RS01750 | Not Available | Negative | 384934 - 385911 | 34579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
