Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| loda/goxa family ctq-dependent oxidase | AMR72_RS17335 | Not Available | Negative | 3912145 - 3915222 | 115512.0 |
| polysaccharide biosynthesis tyrosine autokinase | AMR72_RS17340 | Not Available | Negative | 3915875 - 3918238 | 89249.3 |
| polysaccharide biosynthesis/export family protein | AMR72_RS17345 | Not Available | Negative | 3918240 - 3919010 | 28250.0 |
| lipopolysaccharide biosynthesis protein | AMR72_RS17350 | Not Available | Positive | 3919429 - 3920922 | 56361.8 |
| glycosyltransferase family 8 protein | AMR72_RS17355 | Not Available | Positive | 3920933 - 3921898 | 37854.4 |
| glycosyltransferase family 2 protein | AMR72_RS17360 | Not Available | Positive | 3921916 - 3922896 | 38418.8 |
| atp-grasp fold amidoligase family protein | AMR72_RS17365 | Not Available | Positive | 3922899 - 3923810 | 35705.0 |
| glycosyltransferase | AMR72_RS17370 | Not Available | Positive | 3923807 - 3924967 | 43844.1 |
| capa family protein | AMR72_RS17375 | Not Available | Positive | 3924957 - 3926093 | 42649.0 |
| epsg family protein | AMR72_RS17380 | Not Available | Positive | 3926180 - 3927166 | 38123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
