Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMR72_RS17185 | Not Available | Positive | 3871535 - 3871918 | 14612.3 |
| peptide-methionine (s)-s-oxide reductase msra | AMR72_RS17190 | Not Available | Positive | 3872049 - 3872540 | 18799.9 |
| hypothetical protein | AMR72_RS17195 | Not Available | Negative | 3872574 - 3873062 | 18621.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AMR72_RS17200 | Not Available | Negative | 3873113 - 3873724 | 23620.4 |
| error-prone dna polymerase | AMR72_RS17205 | Not Available | Negative | 3873773 - 3876952 | 119614.0 |
| dna polymerase y family protein | AMR72_RS17210 | Not Available | Negative | 3876949 - 3878439 | 55933.6 |
| imua family protein | AMR72_RS17215 | Not Available | Negative | 3878439 - 3879182 | 27434.0 |
| lexa family transcriptional regulator | AMR72_RS17220 | Not Available | Positive | 3879283 - 3880050 | 29081.9 |
| hypothetical protein | AMR72_RS17225 | Not Available | Positive | 3880067 - 3880312 | 9414.45 |
| tetratricopeptide repeat protein | AMR72_RS17230 | Not Available | Negative | 3880435 - 3881925 | 57936.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
