Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMR72_RS17085 | Not Available | Positive | 3846545 - 3847297 | 28920.2 |
| nad(p)/fad-dependent oxidoreductase | AMR72_RS17090 | Not Available | Positive | 3847326 - 3848486 | 42587.8 |
| ig-like domain-containing protein | AMR72_RS17095 | Not Available | Negative | 3848651 - 3851347 | 97515.0 |
| helix-turn-helix domain-containing protein | AMR72_RS17100 | Not Available | Negative | 3852183 - 3852539 | 13845.0 |
| sdr family oxidoreductase | AMR72_RS17105 | Not Available | Positive | 3852676 - 3853458 | 27448.8 |
| nuclear transport factor 2 family protein | AMR72_RS17110 | Not Available | Positive | 3853480 - 3853803 | 12171.4 |
| coa-binding protein | AMR72_RS17115 | Not Available | Positive | 3854148 - 3854513 | 13319.1 |
| condensation domain-containing protein | AMR72_RS17120 | Not Available | Positive | 3854908 - 3856143 | 46068.3 |
| tetr/acrr family transcriptional regulator | AMR72_RS17125 | Not Available | Positive | 3856380 - 3856943 | 20997.3 |
| nuclear transport factor 2 family protein | AMR72_RS17130 | Not Available | Positive | 3856984 - 3857394 | 16626.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
