Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ppc domain-containing dna-binding protein | AMR72_RS01655 | Not Available | Positive | 366383 - 366907 | 19223.6 |
| duf763 domain-containing protein | AMR72_RS01660 | Not Available | Positive | 366999 - 368216 | 45137.2 |
| dead/deah box helicase | AMR72_RS01665 | Not Available | Negative | 368208 - 369749 | 59487.3 |
| deoxyribonuclease v | AMR72_RS01670 | Not Available | Positive | 369917 - 370624 | 26224.8 |
| duf6155 family protein | AMR72_RS01675 | Not Available | Negative | 370631 - 371143 | 20303.1 |
| hypothetical protein | AMR72_RS01680 | Not Available | Positive | 371272 - 371643 | 14130.7 |
| duf3817 domain-containing protein | AMR72_RS01685 | Not Available | Positive | 371794 - 372096 | 11466.6 |
| mechanosensitive ion channel family protein | AMR72_RS01690 | Not Available | Positive | 372104 - 373348 | 47449.3 |
| acyl-coa thioesterase | AMR72_RS01695 | Not Available | Negative | 373345 - 373743 | 15002.3 |
| nudix hydrolase | AMR72_RS01700 | Not Available | Negative | 373694 - 374161 | 17302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
