Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | AMR72_RS16885 | Not Available | Positive | 3796145 - 3796462 | 12348.6 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | AMR72_RS16890 | Not Available | Positive | 3796472 - 3797683 | 43585.4 |
| duf4835 family protein | AMR72_RS16895 | Not Available | Positive | 3797676 - 3798560 | 33446.2 |
| dna repair protein recn | AMR72_RS16900 | Not Available | Positive | 3798722 - 3800374 | 61325.5 |
| enoyl-acp reductase fabv | AMR72_RS16905 | Not Available | Positive | 3800438 - 3801631 | 43609.8 |
| t9ss type a sorting domain-containing protein | AMR72_RS16910 | Not Available | Positive | 3801904 - 3807624 | 198397.0 |
| glycosyltransferase family 2 protein | AMR72_RS16915 | Not Available | Positive | 3807726 - 3808721 | 37882.2 |
| dephospho-coa kinase | AMR72_RS16920 | Not Available | Positive | 3808721 - 3809311 | 22178.0 |
| sensor histidine kinase kdpd | AMR72_RS16925 | Not Available | Positive | 3809377 - 3810879 | 58286.9 |
| response regulator transcription factor | AMR72_RS16930 | Not Available | Positive | 3810887 - 3811609 | 28120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
