Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS16835 | Not Available | Positive | 3788339 - 3788632 | 11132.0 |
| tyrosinase family protein | AMR72_RS16840 | Not Available | Positive | 3788764 - 3790257 | 56641.5 |
| hypothetical protein | AMR72_RS16845 | Not Available | Positive | 3790550 - 3791002 | 17319.0 |
| hypothetical protein | AMR72_RS16850 | Not Available | Positive | 3791026 - 3791214 | 7526.3 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | AMR72_RS16855 | Not Available | Negative | 3791496 - 3792404 | 33745.7 |
| 5'-nucleotidase c-terminal domain-containing protein | AMR72_RS16860 | Not Available | Negative | 3792406 - 3793185 | 28995.0 |
| duf6913 domain-containing protein | AMR72_RS16865 | Not Available | Positive | 3793236 - 3793754 | 19761.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AMR72_RS16870 | Not Available | Positive | 3793756 - 3794634 | 31332.2 |
| ferritin | AMR72_RS16875 | Not Available | Positive | 3794666 - 3795178 | 19530.2 |
| outer membrane protein assembly factor bamd | AMR72_RS16880 | Not Available | Positive | 3795331 - 3796137 | 31447.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
