Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6495 family protein | AMR72_RS16785 | Not Available | Negative | 3779657 - 3780124 | 18200.3 |
| hypothetical protein | AMR72_RS16790 | Not Available | Positive | 3780257 - 3780865 | 23370.0 |
| 50s ribosomal protein l9 | AMR72_RS16795 | Not Available | Negative | 3780920 - 3781366 | 16313.8 |
| 30s ribosomal protein s18 | AMR72_RS16800 | Not Available | Negative | 3781382 - 3781678 | 11367.1 |
| 30s ribosomal protein s6 | AMR72_RS16805 | Not Available | Negative | 3781681 - 3782025 | 13397.1 |
| lyttr family dna-binding domain-containing protein | AMR72_RS16810 | Not Available | Positive | 3782202 - 3782894 | 26337.6 |
| primosomal protein n' | AMR72_RS16815 | Not Available | Negative | 3782902 - 3785349 | 93255.5 |
| duf2147 domain-containing protein | AMR72_RS16820 | Not Available | Negative | 3785631 - 3786062 | 15689.2 |
| yihy/virulence factor brkb family protein | AMR72_RS16825 | Not Available | Negative | 3786084 - 3787010 | 34659.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | AMR72_RS16830 | Not Available | Negative | 3787010 - 3787867 | 31282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
