Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMR72_RS16535 | Not Available | Positive | 3723915 - 3725207 | 48316.8 |
| duf6252 family protein | AMR72_RS16540 | Not Available | Positive | 3725256 - 3726188 | 31905.6 |
| hypothetical protein | AMR72_RS16545 | Not Available | Positive | 3726331 - 3727230 | 31746.1 |
| endopeptidase la | AMR72_RS16550 | Not Available | Positive | 3727418 - 3729868 | 91712.2 |
| t9ss type a sorting domain-containing protein | AMR72_RS16555 | Not Available | Negative | 3729982 - 3732240 | 81913.6 |
| t9ss type a sorting domain-containing protein | AMR72_RS16560 | Not Available | Negative | 3732460 - 3734793 | 83494.0 |
| type ix secretion system protein porq | AMR72_RS16565 | Not Available | Positive | 3735077 - 3736096 | 37966.7 |
| (d)cmp kinase | AMR72_RS16570 | Not Available | Positive | 3736099 - 3736788 | 26083.3 |
| hypothetical protein | AMR72_RS16575 | Not Available | Positive | 3736818 - 3737000 | 7098.4 |
| nucleoside permease | AMR72_RS16580 | Not Available | Positive | 3737062 - 3738297 | 45507.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
