Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 3716145 - 3716221 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3716331 - 3716407 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3716534 - 3719422 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3719590 - 3719698 | Not Available |
| hypothetical protein | AMR72_RS16505 | Not Available | Positive | 3719832 - 3720125 | 10624.8 |
| endonuclease iii | AMR72_RS16510 | Not Available | Negative | 3720233 - 3720877 | 24106.5 |
| peptide-methionine (r)-s-oxide reductase msrb | AMR72_RS16515 | Not Available | Negative | 3720877 - 3721272 | 14762.2 |
| peptide-methionine (r)-s-oxide reductase msrb | AMR72_RS16520 | Not Available | Negative | 3721374 - 3721769 | 14816.4 |
| alpha/beta fold hydrolase | AMR72_RS16525 | Not Available | Negative | 3721880 - 3722743 | 31894.0 |
| m48 family metallopeptidase | AMR72_RS16530 | Not Available | Positive | 3722942 - 3723757 | 29054.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
