Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | AMR72_RS15785 | Not Available | Positive | 3581428 - 3582240 | 30142.1 |
| abc transporter substrate-binding protein | AMR72_RS15790 | Not Available | Positive | 3582345 - 3583178 | 32176.7 |
| thioredoxin family protein | AMR72_RS15795 | Not Available | Negative | 3583183 - 3583593 | 15735.1 |
| doxx family protein | AMR72_RS15800 | Not Available | Negative | 3583766 - 3584173 | 15142.2 |
| duf4197 domain-containing protein | AMR72_RS15805 | Not Available | Negative | 3584437 - 3585153 | 26000.6 |
| duf4197 domain-containing protein | AMR72_RS15810 | Not Available | Negative | 3585170 - 3585907 | 26426.3 |
| catalase | AMR72_RS15815 | Not Available | Positive | 3586164 - 3587648 | 56617.4 |
| eama family transporter | AMR72_RS15820 | Not Available | Negative | 3587895 - 3588788 | 33831.0 |
| voc family protein | AMR72_RS15825 | Not Available | Positive | 3589028 - 3589675 | 25115.8 |
| methylmalonyl-coa mutase family protein | AMR72_RS15830 | Not Available | Positive | 3589775 - 3593206 | 127981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
