Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | AMR72_RS15335 | Not Available | Positive | 3489369 - 3489551 | 6634.51 |
| hypothetical protein | AMR72_RS15340 | Not Available | Positive | 3489638 - 3489991 | 13306.9 |
| duf1810 domain-containing protein | AMR72_RS15345 | Not Available | Negative | 3489994 - 3490422 | 16050.5 |
| dna ligase d | AMR72_RS15350 | Not Available | Negative | 3490426 - 3493101 | 100604.0 |
| duf4385 domain-containing protein | AMR72_RS15355 | Not Available | Positive | 3493192 - 3493671 | 18587.8 |
| response regulator | AMR72_RS15360 | Not Available | Negative | 3493701 - 3494120 | 15949.9 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AMR72_RS15365 | Not Available | Negative | 3494221 - 3494838 | 24024.7 |
| exonuclease domain-containing protein | AMR72_RS15370 | Not Available | Negative | 3494825 - 3496231 | 52815.6 |
| dna polymerase iii subunit alpha | AMR72_RS15375 | Not Available | Negative | 3496228 - 3499305 | 117590.0 |
| dna polymerase iv | AMR72_RS15380 | Not Available | Negative | 3499306 - 3500460 | 43401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
