Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMR72_RS15185 | Not Available | Negative | 3444623 - 3445105 | 18760.8 |
| duf932 domain-containing protein | AMR72_RS15190 | Not Available | Negative | 3445161 - 3446204 | 38095.0 |
| single-stranded dna-binding protein | AMR72_RS15195 | Not Available | Negative | 3446236 - 3446637 | 14962.6 |
| hachiman antiphage defense system protein hama | AMR72_RS15200 | Not Available | Positive | 3447140 - 3448135 | 38175.4 |
| dead/deah box helicase | AMR72_RS15205 | Not Available | Positive | 3448125 - 3450788 | 102818.0 |
| comec/rec2 family competence protein | AMR72_RS15210 | Not Available | Positive | 3450994 - 3451848 | 32369.4 |
| patatin-like phospholipase family protein | AMR72_RS15215 | Not Available | Positive | 3451856 - 3453151 | 48562.1 |
| conjugal transfer protein mobc | AMR72_RS15220 | Not Available | Negative | 3453158 - 3455140 | 75515.2 |
| relaxase/mobilization nuclease domain-containing protein | AMR72_RS15225 | Not Available | Negative | 3455167 - 3456435 | 46135.9 |
| plasmid mobilization protein | AMR72_RS15230 | Not Available | Negative | 3456420 - 3456818 | 15307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
