Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMR72_RS15085 | Not Available | Positive | 3412128 - 3412988 | 31809.3 |
| arac family transcriptional regulator | AMR72_RS15090 | Not Available | Positive | 3413053 - 3413970 | 35091.6 |
| nad(p)/fad-dependent oxidoreductase | AMR72_RS15095 | Not Available | Negative | 3413973 - 3415283 | 48428.8 |
| duf3667 domain-containing protein | AMR72_RS15100 | Not Available | Negative | 3415376 - 3416098 | 27578.3 |
| exonuclease domain-containing protein | AMR72_RS15105 | Not Available | Positive | 3416286 - 3417680 | 53463.1 |
| duf429 domain-containing protein | AMR72_RS15110 | Not Available | Positive | 3417677 - 3418402 | 27117.9 |
| hypothetical protein | AMR72_RS15115 | Not Available | Positive | 3418511 - 3418804 | 11189.2 |
| helix-turn-helix domain-containing protein | AMR72_RS15120 | Not Available | Negative | 3418895 - 3419248 | 13569.7 |
| sdr family oxidoreductase | AMR72_RS15125 | Not Available | Positive | 3419352 - 3420095 | 25753.6 |
| duf6252 family protein | AMR72_RS15130 | Not Available | Negative | 3420657 - 3421118 | 16421.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
