Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ph domain-containing protein | AMR72_RS01455 | Not Available | Positive | 321768 - 323270 | 57230.2 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | AMR72_RS01460 | Not Available | Positive | 323304 - 324206 | 32627.7 |
| metal-dependent hydrolase | AMR72_RS01465 | Not Available | Positive | 324245 - 324922 | 24865.7 |
| four helix bundle protein | AMR72_RS01470 | Not Available | Positive | 324959 - 325312 | 13337.0 |
| o-succinylbenzoate synthase | AMR72_RS01475 | Not Available | Positive | 325336 - 326370 | 39280.0 |
| acyl-coa dehydrogenase | AMR72_RS01480 | Not Available | Negative | 326410 - 328716 | 87583.2 |
| gdp-mannose pyrophosphatase nudk | AMR72_RS01485 | Not Available | Negative | 328777 - 329355 | 21879.0 |
| hypothetical protein | AMR72_RS01490 | Not Available | Positive | 329561 - 329953 | 15010.0 |
| duf2911 domain-containing protein | AMR72_RS01495 | Not Available | Negative | 330136 - 330642 | 18174.9 |
| duf294 nucleotidyltransferase-like domain-containing protein | AMR72_RS01500 | Not Available | Positive | 330802 - 332718 | 71791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
