Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | AMR72_RS14885 | Not Available | Positive | 3364406 - 3364825 | 16480.7 |
| duf721 domain-containing protein | AMR72_RS14890 | Not Available | Positive | 3364829 - 3365125 | 11439.1 |
| nucleoside-diphosphate kinase | AMR72_RS14895 | Not Available | Negative | 3365175 - 3365594 | 14918.7 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | AMR72_RS14900 | Not Available | Negative | 3365735 - 3367324 | 61176.2 |
| radical sam protein | AMR72_RS14905 | Not Available | Positive | 3367563 - 3369782 | 84171.7 |
| hypothetical protein | AMR72_RS14910 | Not Available | Negative | 3369794 - 3370180 | 14891.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | AMR72_RS14915 | Not Available | Negative | 3370260 - 3371588 | 50325.5 |
| ompp1/fadl family transporter | AMR72_RS14920 | Not Available | Negative | 3371786 - 3373288 | 54616.0 |
| hypothetical protein | AMR72_RS14925 | Not Available | Negative | 3373354 - 3374475 | 39855.3 |
| proline--trna ligase | AMR72_RS14930 | Not Available | Positive | 3374576 - 3376048 | 55750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
