Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine dipeptidase | AMR72_RS14835 | Not Available | Positive | 3357416 - 3358066 | 25088.9 |
| 3'-5' exonuclease | AMR72_RS14840 | Not Available | Positive | 3358178 - 3358954 | 29529.2 |
| fumarylacetoacetate hydrolase family protein | AMR72_RS14845 | Not Available | Positive | 3358974 - 3359585 | 23108.8 |
| hpt domain-containing protein | AMR72_RS14850 | Not Available | Positive | 3359585 - 3359929 | 13145.9 |
| cina family nicotinamide mononucleotide deamidase-related protein | AMR72_RS14855 | Not Available | Positive | 3359933 - 3361180 | 45453.8 |
| 50s ribosomal protein l28 | AMR72_RS14860 | Not Available | Positive | 3361260 - 3361496 | 8735.89 |
| 50s ribosomal protein l33 | AMR72_RS14865 | Not Available | Positive | 3361525 - 3361707 | 6848.49 |
| duf4295 domain-containing protein | AMR72_RS14870 | Not Available | Positive | 3361717 - 3361869 | 5476.83 |
| signal recognition particle-docking protein ftsy | AMR72_RS14875 | Not Available | Positive | 3361964 - 3362917 | 34441.2 |
| hypothetical protein | AMR72_RS14880 | Not Available | Positive | 3363073 - 3364251 | 44283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
