Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | AMR72_RS14635 | Not Available | Negative | 3317651 - 3318169 | 19915.7 |
| duf6929 family protein | AMR72_RS14640 | Not Available | Negative | 3318341 - 3319186 | 31148.7 |
| ppk2 family polyphosphate kinase | AMR72_RS14645 | Not Available | Positive | 3319258 - 3320139 | 34766.2 |
| hypothetical protein | AMR72_RS14650 | Not Available | Negative | 3320142 - 3320762 | 24183.9 |
| hypothetical protein | AMR72_RS14655 | Not Available | Negative | 3320809 - 3321138 | 12232.6 |
| hypothetical protein | AMR72_RS14660 | Not Available | Negative | 3321238 - 3321723 | 17818.7 |
| mate family efflux transporter | AMR72_RS14665 | Not Available | Positive | 3321960 - 3323360 | 50988.9 |
| hypothetical protein | AMR72_RS14670 | Not Available | Positive | 3323497 - 3323727 | 9152.51 |
| hypothetical protein | AMR72_RS14675 | Not Available | Positive | 3323732 - 3324163 | 16528.6 |
| methylmalonyl co-a mutase-associated gtpase meab | AMR72_RS14680 | Not Available | Negative | 3324150 - 3325241 | 39493.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
