Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4442 domain-containing protein | AMR72_RS14535 | Not Available | Positive | 3294228 - 3294680 | 16828.2 |
| tigr01777 family oxidoreductase | AMR72_RS14540 | Not Available | Positive | 3294761 - 3295666 | 33574.6 |
| ycei family protein | AMR72_RS14545 | Not Available | Negative | 3295713 - 3296435 | 26202.4 |
| nucleotide exchange factor grpe | AMR72_RS14550 | Not Available | Positive | 3296555 - 3297154 | 22577.0 |
| molecular chaperone dnaj | AMR72_RS14555 | Not Available | Positive | 3297191 - 3298315 | 40412.2 |
| duf3667 domain-containing protein | AMR72_RS14560 | Not Available | Positive | 3298591 - 3299175 | 22478.5 |
| abc transporter atp-binding protein | AMR72_RS14565 | Not Available | Positive | 3299237 - 3300163 | 34810.1 |
| abc transporter permease | AMR72_RS14570 | Not Available | Positive | 3300163 - 3301452 | 47988.8 |
| sigma-54 dependent transcriptional regulator | AMR72_RS14575 | Not Available | Positive | 3301579 - 3302742 | 43173.4 |
| dead/deah box helicase | AMR72_RS14580 | Not Available | Positive | 3302888 - 3303589 | 26816.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
