Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rossmann-like and duf2520 domain-containing protein | AMR72_RS01405 | Not Available | Negative | 307940 - 308695 | 28202.4 |
| m1 family metallopeptidase | AMR72_RS01410 | Not Available | Negative | 308949 - 310874 | 72330.1 |
| cytochrome c biogenesis protein ccsa | AMR72_RS01415 | Not Available | Positive | 311060 - 314257 | 122284.0 |
| glutathione peroxidase | AMR72_RS01420 | Not Available | Positive | 314293 - 314883 | 22070.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AMR72_RS01425 | Not Available | Positive | 314946 - 316604 | 61672.4 |
| s1 rna-binding domain-containing protein | AMR72_RS01430 | Not Available | Positive | 316701 - 317534 | 32307.1 |
| sterol desaturase family protein | AMR72_RS01435 | Not Available | Negative | 317570 - 318784 | 48671.1 |
| serine hydrolase | AMR72_RS01440 | Not Available | Negative | 318899 - 320092 | 46154.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | AMR72_RS01445 | Not Available | Positive | 320350 - 321183 | 30955.8 |
| ph domain-containing protein | AMR72_RS01450 | Not Available | Positive | 321251 - 321778 | 19695.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
