Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMR72_RS14435 | Not Available | Negative | 3272719 - 3273189 | 17696.2 |
| nmra family nad(p)-binding protein | AMR72_RS14440 | Not Available | Positive | 3273381 - 3274250 | 32208.4 |
| lyttr family dna-binding domain-containing protein | AMR72_RS14445 | Not Available | Negative | 3274265 - 3274972 | 26639.4 |
| sensor histidine kinase | AMR72_RS14450 | Not Available | Negative | 3274969 - 3275994 | 39672.6 |
| duf5694 domain-containing protein | AMR72_RS14455 | Not Available | Positive | 3276214 - 3277014 | 30689.9 |
| outer membrane beta-barrel family protein | AMR72_RS14460 | Not Available | Positive | 3277043 - 3279424 | 90732.5 |
| tolc family protein | AMR72_RS14465 | Not Available | Negative | 3279553 - 3280995 | 53745.2 |
| efflux rnd transporter permease subunit | AMR72_RS14470 | Not Available | Negative | 3280988 - 3284182 | 117681.0 |
| efflux rnd transporter periplasmic adaptor subunit | AMR72_RS14475 | Not Available | Negative | 3284209 - 3285291 | 41123.7 |
| hypothetical protein | AMR72_RS14480 | Not Available | Negative | 3285466 - 3285834 | 14031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
