Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | AMR72_RS14385 | Not Available | Negative | 3264614 - 3265447 | 29151.8 |
| rna polymerase sigma factor | AMR72_RS14390 | Not Available | Negative | 3265622 - 3266188 | 22083.5 |
| glycosyltransferase | AMR72_RS14395 | Not Available | Negative | 3266179 - 3267285 | 42946.4 |
| four helix bundle protein | AMR72_RS14400 | Not Available | Negative | 3267389 - 3267760 | 14528.4 |
| udp-n-acetylmuramate dehydrogenase | AMR72_RS14405 | Not Available | Negative | 3267812 - 3268825 | 37282.6 |
| duf2461 domain-containing protein | AMR72_RS14410 | Not Available | Negative | 3268873 - 3269544 | 25979.6 |
| dna replication/repair protein recf | AMR72_RS14415 | Not Available | Negative | 3269608 - 3270687 | 41383.6 |
| tol-pal system ybgf family protein | AMR72_RS14420 | Not Available | Positive | 3270834 - 3271610 | 28091.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | AMR72_RS14425 | Not Available | Positive | 3271613 - 3272104 | 17679.1 |
| iron chaperone | AMR72_RS14430 | Not Available | Negative | 3272297 - 3272719 | 15535.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
