Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain Z2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1261992 bp
Thymine Count
1262733 bp
Guanine Count
812011 bp
Cytosine Count
805488 bp
Genome Length
4142224 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4,5-dopa dioxygenase extradiol | AMR72_RS14035 | Not Available | Negative | 3192930 - 3193760 | 30443.6 |
| helix-turn-helix transcriptional regulator | AMR72_RS14040 | Not Available | Negative | 3193904 - 3194728 | 32073.0 |
| hypothetical protein | AMR72_RS14045 | Not Available | Negative | 3194782 - 3195021 | 8601.45 |
| res family nad+ phosphorylase | AMR72_RS14050 | Not Available | Negative | 3195101 - 3195562 | 17164.7 |
| antitoxin xre-like helix-turn-helix domain-containing protein | AMR72_RS14055 | Not Available | Negative | 3195559 - 3195990 | 16412.8 |
| tetr family transcriptional regulator c-terminal domain-containing protein | AMR72_RS14060 | Not Available | Positive | 3196211 - 3196870 | 25518.4 |
| aarf/abc1/ubib kinase family protein | AMR72_RS14065 | Not Available | Positive | 3196872 - 3198191 | 50598.5 |
| hypothetical protein | AMR72_RS14070 | Not Available | Negative | 3198260 - 3198874 | 23367.2 |
| siderophore-interacting protein | AMR72_RS14075 | Not Available | Negative | 3198926 - 3199645 | 27196.2 |
| arac family transcriptional regulator | AMR72_RS14080 | Not Available | Negative | 3199724 - 3200590 | 32984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
